Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932781.1_cds_XP_016479233.1_70795
CDS Infomation

[gene=LOC107800555] [db_xref=GeneID:107800555] [protein=26S protease regulatory subunit 6A homolog] [protein_id=XP_016479233.1] [location=complement(join(35811..35888,36741..36881,36990..37109,37316..37403,37771..37889,43339..43722,43963..44070,51540..51773))] [gbkey=CDS]
Sequence

ATGGCGACACCGATGGCGGCAGAGGACGGCAACTTCGAAGATGACCTGTATGCCATGTCC
ACTGATGATATTATTAGGGCTGCGCGTTTGCTTGACAACGAAATCCGAATTTTAAAGGAA
GAGCTGCAGAGAACGAATCTAGAGTTGGATTCATTCAAGGAAAAGATAAAGGAGAATCAG
GAGAAAATTAAGCTCAACAAGCAGCTTCCTTACTTGGTCGGCAACATTGTTGAGATTTTG
GAAATGAATCCAGAGGAAGAGGATGAGGAGGATGGTGCAAATATTGATCTTGACTCACAA
AGGAAGGGCAAATGTGTTGTACTGAAAACGTCCACGCGCCAGACAATTTTCCTGCCTGTT
GTTGGCCTTGTTGACCCGGATAAGTTAAAGCCTGGTGATCTTGTCGGAGTAAACAAAGAC
AGTTATTTGATATTAGATACATTGCCATCTGAATATGATTCTCGGGTAAAGGCAATGGAA
GTTGATGAAAAACCAACTGAAGACTACAATGATATTGGAGGTCTGGAGAAACAGATTCAA
GAACTCGTAGAGGCAATTGTTTTGCCTATGACACACAAAGAACGGTTCCAGAAATTAGGC
GTCCGCCCTCCAAAAGGAGTCCTTTTGTATGGGCCTCCAGGGACCGGGAAAACTCTCATG
GCCCGAGCCTGTGCTGCACAGACAAATGCCACTTTTCTTAAGCTAGCAGGGCCGCAACTT
GTGCAGATGTTCATTGGAGATGGAGCAAAACTTGTCCGTGATGCTTTCCAGCTGGCAAAG
GAGAAATCACCTTGCATCATTTTTATTGATGAGATTGATGCTATAGGCACAAAGCGTTTT
GATAGTGAAGTTAGTGGGGATCGAGAGGTCCAACGAACTATGTTGGAGTTACTTAATCAG
CTCGATGGTTTCAGCAGTGACGATAGGATAAAGGTTATAGCAGCAACAAACCGGGCTGAT
ATTTTGGATCCTGCTTTGATGCGATCTGGTCGATTGGATCGTAAAATTGAGTTCCCCCAT
CCCACAGAGGAAGCTAGGGCTCGAATCTTGCAGATTCACTCTAGAAAGATGAATGTTCAC
CCCGATGTGAATTTCGAGGAACTGGCTCGATCCACAGATGATTTTAATGGGGCTCAATTA
AAAGCTGTATGTGTTGAGGCAGGGATGTTAGCACTCCGCCGTGATGCCACTGAGGTTACC
CATGAAGATTTCAATGAAGGTATCATTCAGGTTCAGGCTAAGAAGAAAGCCAGCTTAAAC
TACTATGCTTAA

Peptide Sequence

PEP ID

XP_016479233.1
PEP Infomation

PREDICTED: 26S protease regulatory subunit 6A homolog [Nicotiana tabacum]
Sequence

MATPMAAEDGNFEDDLYAMSTDDIIRAARLLDNEIRILKEELQRTNLELDSFKEKIKENQ
EKIKLNKQLPYLVGNIVEILEMNPEEEDEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ
ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL
VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH
PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKKASLN
YYA

Transcript Sequence

Gene sequence data has not been registered.